EnhancerDB
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  3. rs553429335[chr1:221142267]
Enhancers that have rs553429335[chr1:221142267]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 221128245 221142928 enh27544
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Liver Astrocyte Lung (A549) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus
Transcript factors that have rs553429335[chr1:221142267]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 221142246 221142267 IRF1 JASPAR yes 35516031
chr1 221142252 221142267 FOXP1 JASPAR yes 35516034
chr1 221142253 221142268 FOXP1 JASPAR yes 35516035
chr1 221142254 221142269 FOXP1 JASPAR yes 35516036
chr1 221142255 221142270 FOXP1 JASPAR yes 35516037
chr1 221142256 221142271 FOXP1 JASPAR yes 35516038
chr1 221142257 221142272 FOXP1 JASPAR yes 35516039
chr1 221142261 221142276 STAT1 JASPAR yes 35516040
chr1 221142263 221142274 STAT1 JASPAR yes 35516041
chr1 221142265 221142276 HOXC13 JASPAR yes 35516042
Genes associated with rs553429335[chr1:221142267], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More