EnhancerDB
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  3. rs553501218[chr17:80165214]
Enhancers that have rs553501218[chr17:80165214]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80156765 80165310 enh32382
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Lung (PC-9) Breast Pancreas (Panc1) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs553501218[chr17:80165214]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80165203 80165218 MEF2C JASPAR yes 56353119
chr17 80165204 80165219 MEF2A JASPAR yes 56353120
chr17 80165206 80165220 IRF7 JASPAR yes 56353121
chr17 80165207 80165222 FOXP1 JASPAR yes 56353122
chr17 80165209 80165224 FOXP1 JASPAR yes 56353123
chr17 80165209 80165224 MEF2C JASPAR yes 56353124
chr17 80165209 80165230 IRF1 JASPAR yes 56353125
chr17 80165210 80165225 FOXP1 JASPAR yes 56353126
chr17 80165210 80165231 IRF1 JASPAR yes 56353127
chr17 80165211 80165226 FOXP1 JASPAR yes 56353128
chr17 80165211 80165232 IRF1 JASPAR yes 56353129
chr17 80165212 80165227 FOXP1 JASPAR yes 56353130
chr17 80165212 80165233 IRF1 JASPAR yes 56353131
chr17 80165213 80165219 TBP TRANSFAC yes 56353132
chr17 80165213 80165228 FOXP1 JASPAR yes 56353133
Genes associated with rs553501218[chr17:80165214], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More