EnhancerDB
  1. Home
  2. SNP
  3. rs553516398[chr1:24229278]
Enhancers that have rs553516398[chr1:24229278]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24220965 24239635 enh130
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Thymus Stomach
chr1 24229023 24229388 vista759
VISTA
Transcript factors that have rs553516398[chr1:24229278]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24229275 24229286 NRF1 JASPAR yes 27464445
chr1 24229275 24229286 NRF1 JASPAR yes 118250239
chr1 24229276 24229284 SP1 TRANSFAC yes 27464446
chr1 24229276 24229284 SP1 TRANSFAC yes 118250240
chr1 24229276 24229287 NRF1 JASPAR yes 27464447
chr1 24229276 24229287 NRF1 JASPAR yes 118250241
Genes associated with rs553516398[chr1:24229278], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More