EnhancerDB
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  3. rs553541530[chr17:72415023]
Enhancers that have rs553541530[chr17:72415023]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 72407745 72415722 enh57718
Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Liver Blood (OCI-LY7) Lung (A549) Thyroid Lung (PC-9) Pancreas Stomach
Transcript factors that have rs553541530[chr17:72415023]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 72412509 72417444 ZNF274 GTRD no Liver (HepG2) 21786601
chr17 72414673 72415297 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21786678
chr17 72414687 72415303 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21786679
chr17 72414718 72415130 ZNF274 GTRD no Liver (HepG2) 21786680
chr17 72414780 72415113 ZNF274 GTRD no Liver (HepG2) 21786681
chr17 72414805 72415145 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21786682
chr17 72414826 72415162 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21786683
chr17 72414855 72415131 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21786684
chr17 72414859 72415139 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21786685
chr17 72414866 72415126 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21786686
chr17 72415013 72415026 ELF1 JASPAR yes 55909377
chr17 72415014 72415024 ELK1 JASPAR yes 55909378
chr17 72415014 72415026 ELF1 JASPAR yes 55909379
chr17 72415014 72415026 ELF4 JASPAR yes 55909380
chr17 72415014 72415027 ELF3 JASPAR yes 55909381
chr17 72415015 72415026 ELF5 JASPAR yes 55909382
chr17 72415016 72415026 GABPA JASPAR yes 55909383
chr17 72415016 72415027 ELK4 JASPAR yes 55909384
chr17 72415018 72415024 ETS1 JASPAR yes 55909385
chr17 72415018 72415024 SPI1 JASPAR yes 55909386
Genes associated with rs553541530[chr17:72415023], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More