EnhancerDB
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  3. rs553548246[chr1:116257629]
Enhancers that have rs553548246[chr1:116257629]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116249565 116259755 enh12179
Prostate (PC-3) Kidney Epithelial (MCF-7) Large Intestine Esophagus Stomach Placenta Thyroid Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs553548246[chr1:116257629]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116257619 116257634 LEF1 JASPAR yes 31754198
chr1 116257623 116257629 LEF1 TRANSFAC yes 31754199
chr1 116257623 116257629 SOX10 JASPAR yes 31754200
Genes associated with rs553548246[chr1:116257629], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More