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- rs553551828[chr19:1540425]
Enhancers that have rs553551828[chr19:1540425]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
1537125 |
1551004 |
enh17842 |
|
|
Transcript factors that have rs553551828[chr19:1540425]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
1540381
|
1541144
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21831981
|
|
|
chr19
|
1540416
|
1540431
|
STAT1
|
JASPAR
|
yes
|
|
112015851
|
|
|
chr19
|
1540418
|
1540429
|
STAT1
|
JASPAR
|
yes
|
|
112015852
|
|
|
chr19
|
1540418
|
1540429
|
STAT3
|
JASPAR
|
yes
|
|
112015853
|
|
|
chr19
|
1540419
|
1540427
|
STAT6
|
TRANSFAC
|
yes
|
|
112015854
|
|
|
chr19
|
1540423
|
1540428
|
ETS2
|
TRANSFAC
|
yes
|
|
112015855
|
|
Genes associated with rs553551828[chr19:1540425], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |