EnhancerDB
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  3. rs553586180[chr1:17221183]
Enhancers that have rs553586180[chr1:17221183]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
Transcript factors that have rs553586180[chr1:17221183]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17221179 17221184 H4TF1 TRANSFAC yes 27062437
chr1 17221179 17221194 STAT1 JASPAR yes 27062438
chr1 17221181 17221192 STAT1 JASPAR yes 27062439
chr1 17221181 17221192 STAT3 JASPAR yes 27062440
Genes associated with rs553586180[chr1:17221183], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More