EnhancerDB
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  3. rs553596318[chr19:1671666]
Enhancers that have rs553596318[chr19:1671666]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1657651 1678035 enh4954
Large Intestine Prostate (RWPE1) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Stomach
Transcript factors that have rs553596318[chr19:1671666]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1671225 1672677 ZNF274 GTRD no Blood (GM12878) 21832380
chr19 1671225 1672677 ZNF274 GTRD no Blood (GM12878) 108354620
chr19 1671225 1672727 ZNF274 GTRD no Bone Marrow (K562) 108354621
chr19 1671226 1672702 ZNF274 GTRD no Bone Marrow (K562) 108354622
chr19 1671226 1673630 ZNF274 GTRD no Bone Marrow (K562) 108354623
chr19 1671231 1671870 ZNF274 GTRD no Blood (GM12878) 21832381
chr19 1671248 1672763 ZNF274 GTRD no Blood (GM12878) 21832383
chr19 1671248 1672763 ZNF274 GTRD no Blood (GM12878) 108354624
chr19 1671410 1672956 ZNF143 GTRD no Epithelial (MCF-7) 108354625
chr19 1671413 1673437 ZNF274 GTRD no Bone Marrow (K562) 108354626
chr19 1671431 1673421 ZNF143 GTRD no Epithelial (MCF-7) 108354627
chr19 1671460 1672722 ZNF274 GTRD no Bone Marrow (K562) 108354628
chr19 1671491 1672703 ZNF274 GTRD no Blood (GM12878) 21832384
chr19 1671491 1672703 ZNF274 GTRD no Blood (GM12878) 108354629
chr19 1671558 1672892 TCF7L2 GTRD no Colon (HCT116) 108354630
chr19 1671573 1672924 ZBTB33 GTRD no Lung (A549) 108354631
chr19 1671581 1672765 ZNF274 GTRD no Blood (GM12878) 21832385
chr19 1671581 1672765 ZNF274 GTRD no Blood (GM12878) 108354632
chr19 1671582 1672294 ZNF274 GTRD no Blood (GM12878) 21832386
chr19 1671599 1672825 TCF7L2 GTRD no Colon (HCT116) 108354633
chr19 1671605 1672962 TCF7L2 GTRD no Colon (HCT116) 108354634
chr19 1671615 1672716 ZNF274 GTRD no Bone Marrow (K562) 108354635
chr19 1671620 1672924 ZBTB33 GTRD no Lung (A549) 108354636
chr19 1671629 1672884 ZNF274 GTRD no Blood (GM12878) 21832387
chr19 1671629 1672884 ZNF274 GTRD no Blood (GM12878) 108354637
chr19 1671633 1672763 ZNF143 GTRD no Epithelial (MCF-7) 108354638
chr19 1671635 1673008 TCF7L2 GTRD no Colon (HCT116) 108354639
chr19 1671635 1673983 ZNF274 GTRD no Bone Marrow (K562) 108354640
chr19 1671640 1672879 TCF7L2 GTRD no Colon (HCT116) 108354641
chr19 1671644 1672925 ZNF274 GTRD no Blood (GM12878) 21832388
chr19 1671644 1672925 ZNF274 GTRD no Blood (GM12878) 108354642
chr19 1671645 1673032 TCF7L2 GTRD no Colon (HCT116) 108354643
chr19 1671663 1671669 TBP TRANSFAC yes 112023578
chr19 1671663 1672937 ZNF274 GTRD no Bone Marrow (K562) 108354644
chr19 1671664 1671685 IRF1 JASPAR yes 112023579
chr19 1671664 1672745 ZBTB33 GTRD no Lung (A549) 108354645
chr19 1671666 1671686 RREB1 JASPAR yes 112023580
Genes associated with rs553596318[chr19:1671666], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More