EnhancerDB
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  3. rs553603604[chr1:220542096]
Enhancers that have rs553603604[chr1:220542096]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220534493 220550315 enh12681
Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Bone (Osteoblast) Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs553603604[chr1:220542096]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220541816 220542123 ZNF274 GTRD no Cervix (HeLa-S3) 21381679
chr1 220541823 220542154 ZNF143 GTRD no Epithelial (MCF-7) 21381680
chr1 220541841 220542252 ZNF143 GTRD no Epithelial (MCF-7) 21381681
chr1 220541842 220542168 ZNF143 GTRD no Epithelial (MCF-7) 21381682
chr1 220541861 220542117 ZNF143 GTRD no Epithelial (MCF-7) 21381683
chr1 220541901 220542154 ZNF143 GTRD no Epithelial (MCF-7) 21381684
chr1 220542086 220542097 ELK4 JASPAR yes 35489115
chr1 220542086 220542097 FLI1 JASPAR yes 35489116
chr1 220542087 220542100 ELF1 JASPAR yes 35489117
Genes associated with rs553603604[chr1:220542096], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More