EnhancerDB
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  3. rs553618753[chr1:116846800]
Enhancers that have rs553618753[chr1:116846800]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116846225 116879811 enh580
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs553618753[chr1:116846800]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116845318 116847005 ZNF274 GTRD no Bone Marrow (K562) 21331885
chr1 116845820 116847381 ZNF274 GTRD no Bone Marrow (K562) 21331899
chr1 116845991 116846836 ZNF274 GTRD no Bone Marrow (K562) 21331907
chr1 116846079 116846818 ZNF274 GTRD no Bone Marrow (K562) 21331917
chr1 116846799 116846803 NFE TRANSFAC yes 31791607
chr1 116846799 116846804 GATA1 TRANSFAC yes 31791608
chr1 116846799 116846805 GATA3 JASPAR yes 31791609
Genes associated with rs553618753[chr1:116846800], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More