EnhancerDB
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  3. rs553709091[chr1:17223789]
Enhancers that have rs553709091[chr1:17223789]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
Transcript factors that have rs553709091[chr1:17223789]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17223779 17223793 BATF3 JASPAR yes 27062808
chr1 17223780 17223792 JDP2 JASPAR yes 27062809
chr1 17223780 17223795 JUND JASPAR yes 27062810
chr1 17223781 17223794 JUN JASPAR yes 27062811
chr1 17223782 17223789 JUN TRANSFAC yes 27062812
chr1 17223786 17223800 RORA JASPAR yes 27062813
Genes associated with rs553709091[chr1:17223789], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More