-
Home
- SNP
- rs553716441[chr19:5829716]
Enhancers that have rs553716441[chr19:5829716]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
Transcript factors that have rs553716441[chr19:5829716]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
5826041
|
5830401
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108375906
|
|
|
chr19
|
5826047
|
5830507
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108375907
|
|
|
chr19
|
5826081
|
5830172
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108375908
|
|
|
chr19
|
5826138
|
5830069
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108375910
|
|
|
chr19
|
5826165
|
5830509
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108375911
|
|
|
chr19
|
5826213
|
5830555
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108375913
|
|
|
chr19
|
5826233
|
5830289
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108375914
|
|
|
chr19
|
5826236
|
5830035
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108375915
|
|
|
chr19
|
5826333
|
5830209
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108375917
|
|
|
chr19
|
5826348
|
5830259
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108375918
|
|
|
chr19
|
5826473
|
5829769
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108375920
|
|
|
chr19
|
5827197
|
5829776
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108375922
|
|
|
chr19
|
5827496
|
5829928
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108375927
|
|
|
chr19
|
5827633
|
5829767
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108375931
|
|
|
chr19
|
5827720
|
5830453
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108375936
|
|
|
chr19
|
5827877
|
5829753
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108375941
|
|
|
chr19
|
5828134
|
5829827
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108375942
|
|
|
chr19
|
5828651
|
5829900
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108375943
|
|
|
chr19
|
5828706
|
5829748
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108375944
|
|
|
chr19
|
5828811
|
5829822
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108375945
|
|
|
chr19
|
5828845
|
5830483
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108375947
|
|
|
chr19
|
5828861
|
5829952
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108375949
|
|
|
chr19
|
5828964
|
5830435
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108375956
|
|
|
chr19
|
5829054
|
5829888
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108375959
|
|
|
chr19
|
5829124
|
5830579
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108375963
|
|
|
chr19
|
5829238
|
5829922
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108375964
|
|
|
chr19
|
5829417
|
5829941
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108375965
|
|
|
chr19
|
5829470
|
5829821
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108375966
|
|
|
chr19
|
5829509
|
5829835
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108375967
|
|
|
chr19
|
5829530
|
5829755
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108375968
|
|
|
chr19
|
5829533
|
5829797
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108375969
|
|
|
chr19
|
5829537
|
5829777
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108375970
|
|
|
chr19
|
5829537
|
5829891
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108375971
|
|
Genes associated with rs553716441[chr19:5829716], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |