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- rs553780[chr5:177961860]
Enhancers that have rs553780[chr5:177961860]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr5 |
177960302 |
177986655 |
enh66151 |
|
|
Transcript factors that have rs553780[chr5:177961860]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr5
|
177961856
|
177961866
|
GSX1
|
JASPAR
|
yes
|
|
68138015
|
|
|
chr5
|
177961856
|
177961866
|
GSX2
|
JASPAR
|
yes
|
|
68138016
|
|
|
chr5
|
177961856
|
177961867
|
HOXC13
|
JASPAR
|
yes
|
|
68138017
|
|
|
chr5
|
177961857
|
177961865
|
NKX6-1
|
JASPAR
|
yes
|
|
68138018
|
|
|
chr5
|
177961857
|
177961865
|
NKX6-2
|
JASPAR
|
yes
|
|
68138019
|
|
|
chr5
|
177961857
|
177961867
|
HOXC10
|
JASPAR
|
yes
|
|
68138020
|
|
|
chr5
|
177961857
|
177961867
|
HOXD13
|
JASPAR
|
yes
|
|
68138021
|
|
|
chr5
|
177961859
|
177961863
|
YY1
|
TRANSFAC
|
yes
|
|
68138022
|
|
Genes associated with rs553780[chr5:177961860], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |