EnhancerDB
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  3. rs553817335[chr1:218565706]
Enhancers that have rs553817335[chr1:218565706]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 218562007 218578395 enh12671
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Lung (PC-9) Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Epithelial (MCF-7)
Transcript factors that have rs553817335[chr1:218565706]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 218565693 218565708 FOXA1 JASPAR yes 35375410
chr1 218565694 218565706 FOXC2 JASPAR yes 35375411
chr1 218565694 218565714 RREB1 JASPAR yes 35375412
chr1 218565695 218565707 FOXI1 JASPAR yes 35375413
chr1 218565695 218565715 RREB1 JASPAR yes 35375414
chr1 218565698 218565718 RREB1 JASPAR yes 35375415
chr1 218565699 218565711 FOXI1 JASPAR yes 35375416
chr1 218565699 218565719 RREB1 JASPAR yes 35375417
chr1 218565702 218565722 RREB1 JASPAR yes 35375418
chr1 218565703 218565715 FOXI1 JASPAR yes 35375419
chr1 218565703 218565723 RREB1 JASPAR yes 35375420
chr1 218565706 218565726 RREB1 JASPAR yes 35375421
Genes associated with rs553817335[chr1:218565706], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More