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- rs553854790[chr16:19398009]
Enhancers that have rs553854790[chr16:19398009]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
19385025 |
19410955 |
enh16592 |
|
|
Transcript factors that have rs553854790[chr16:19398009]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
19395056
|
19398140
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21695421
|
|
|
chr16
|
19398007
|
19398018
|
CDX2
|
JASPAR
|
yes
|
|
9865194
|
|
|
chr16
|
19398008
|
19398012
|
ESR1
|
TRANSFAC
|
yes
|
|
9865195
|
|
|
chr16
|
19398008
|
19398019
|
HOXA10
|
JASPAR
|
yes
|
|
9865196
|
|
|
chr16
|
19398008
|
19398019
|
HOXC11
|
JASPAR
|
yes
|
|
9865197
|
|
|
chr16
|
19398008
|
19398019
|
HOXC12
|
JASPAR
|
yes
|
|
9865198
|
|
|
chr16
|
19398008
|
19398019
|
HOXD12
|
JASPAR
|
yes
|
|
9865199
|
|
|
chr16
|
19398009
|
19398018
|
CDX1
|
JASPAR
|
yes
|
|
9865200
|
|
|
chr16
|
19398009
|
19398019
|
HOXC10
|
JASPAR
|
yes
|
|
9865201
|
|
|
chr16
|
19398009
|
19398019
|
HOXD11
|
JASPAR
|
yes
|
|
9865202
|
|
Genes associated with rs553854790[chr16:19398009], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |