EnhancerDB
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  3. rs553864344[chr11:65539470]
Enhancers that have rs553864344[chr11:65539470]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 65532045 65546559 enh14002
Brain (SK-N-MC) Prostate (RWPE1) Esophagus Stomach Placenta Colon (HCT116) Lung (PC-9) Pancreas Epithelial (MCF-7)
Transcript factors that have rs553864344[chr11:65539470]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 65535156 65541859 TCF7L2 GTRD no Colon (HCT116) 21495820
chr11 65535156 65541859 TCF7L2 GTRD no Colon (HCT116) 107981392
chr11 65535798 65541974 TCF7L2 GTRD no Colon (HCT116) 21495822
chr11 65535798 65541974 TCF7L2 GTRD no Colon (HCT116) 107981394
chr11 65535837 65541889 ZNF143 GTRD no Epithelial (MCF-7) 21495823
chr11 65535837 65541889 ZNF143 GTRD no Epithelial (MCF-7) 107981395
chr11 65535929 65541451 TCF7L2 GTRD no Colon (HCT116) 21495825
chr11 65535929 65541451 TCF7L2 GTRD no Colon (HCT116) 107981397
chr11 65536310 65541962 ZNF143 GTRD no Epithelial (MCF-7) 21495826
chr11 65536310 65541962 ZNF143 GTRD no Epithelial (MCF-7) 107981398
chr11 65536897 65541798 TCF7L2 GTRD no Colon (HCT116) 21495828
chr11 65536897 65541798 TCF7L2 GTRD no Colon (HCT116) 107981401
chr11 65537713 65541480 TCF7L2 GTRD no Colon (HCT116) 21495833
chr11 65537981 65541560 TCF7L2 GTRD no Colon (HCT116) 21495834
chr11 65538289 65541136 TCF7L2 GTRD no Colon (HCT116) 21495836
chr11 65538698 65539555 TCF7L2 GTRD no Colon (HCT116) 21495837
chr11 65538713 65539484 TCF7L2 GTRD no Colon (HCT116) 21495838
chr11 65538811 65541588 TCF7L2 GTRD no Colon (HCT116) 21495839
chr11 65538831 65541463 TCF7L2 GTRD no Colon (HCT116) 21495840
chr11 65538881 65541274 TCF7L2 GTRD no Colon (HCT116) 21495841
chr11 65538903 65541896 ZNF143 GTRD no Epithelial (MCF-7) 21495842
chr11 65538963 65541401 TCF7L2 GTRD no Colon (HCT116) 21495843
chr11 65539069 65541298 TCF7L2 GTRD no Colon (HCT116) 21495844
chr11 65539092 65541879 ZNF143 GTRD no Epithelial (MCF-7) 21495845
chr11 65539106 65542392 ZNF143 GTRD no Epithelial (MCF-7) 21495846
chr11 65539296 65542694 ZNF143 GTRD no Epithelial (MCF-7) 21495847
chr11 65539317 65541911 ZNF143 GTRD no Epithelial (MCF-7) 21495848
chr11 65539360 65542297 ZNF143 GTRD no Epithelial (MCF-7) 21495849
chr11 65539370 65542234 ZNF143 GTRD no Epithelial (MCF-7) 21495850
chr11 65539417 65542620 ZNF143 GTRD no Epithelial (MCF-7) 21495851
chr11 65539429 65542039 ZNF143 GTRD no Epithelial (MCF-7) 21495852
chr11 65539436 65541372 ZNF143 GTRD no Epithelial (MCF-7) 21495853
chr11 65539455 65539470 FOXP1 JASPAR yes 39335328
chr11 65539457 65542166 ZNF143 GTRD no Epithelial (MCF-7) 21495854
chr11 65539470 65539474 YY1 TRANSFAC yes 39335340
Genes associated with rs553864344[chr11:65539470], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More