EnhancerDB
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  3. rs553880306[chr1:95042664]
Enhancers that have rs553880306[chr1:95042664]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 95042223 95053775 enh12074
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Esophagus Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs553880306[chr1:95042664]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 95041096 95043896 AR GTRD no Prostate (PC-3) 21325524
chr1 95042643 95042664 IRF1 JASPAR yes 30888881
chr1 95042644 95042665 IRF1 JASPAR yes 30888883
chr1 95042648 95042669 IRF1 JASPAR yes 30888884
chr1 95042649 95042664 FOXP1 JASPAR yes 30888885
chr1 95042649 95042670 IRF1 JASPAR yes 30888886
chr1 95042651 95042666 FOXP1 JASPAR yes 30888887
chr1 95042653 95042668 FOXP1 JASPAR yes 30888888
chr1 95042654 95042669 FOXP1 JASPAR yes 30888889
chr1 95042655 95042670 FOXP1 JASPAR yes 30888890
chr1 95042656 95042671 FOXP1 JASPAR yes 30888891
chr1 95042657 95042672 FOXP1 JASPAR yes 30888892
Genes associated with rs553880306[chr1:95042664], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More