Enhancers that have rs553885610[chr11:66488135]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 66484054 66488516 enh14009

Transcript factors that have rs553885610[chr11:66488135]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 66486429 66488135 ZNF143 GTRD no Epithelial (MCF-7) 21496596
chr11 66486429 66488135 ZNF143 GTRD no Epithelial (MCF-7) 107982795
chr11 66487206 66488142 ZNF143 GTRD no Epithelial (MCF-7) 21496597
chr11 66487206 66488142 ZNF143 GTRD no Epithelial (MCF-7) 107982796
chr11 66487640 66488160 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107982809
chr11 66487677 66488153 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107982819
chr11 66487693 66488243 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107982824
chr11 66487693 66488278 POLR2A UCSC Txn Factor no Conserved 107982825
chr11 66487741 66488265 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107982839
chr11 66487752 66488196 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107982844
chr11 66487769 66488285 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107982846
chr11 66487833 66488144 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107982854
chr11 66488116 66488137 ZNF263 JASPAR yes 39376851
chr11 66488118 66488139 ZNF263 JASPAR yes 39376852
chr11 66488123 66488138 NR2C2 JASPAR yes 39376853
chr11 66488125 66488146 ZNF263 JASPAR yes 39376854

Genes associated with rs553885610[chr11:66488135], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More