EnhancerDB
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  3. rs553999583[chr1:178578441]
Enhancers that have rs553999583[chr1:178578441]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178572424 178586155 enh756
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus
Transcript factors that have rs553999583[chr1:178578441]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178578103 178578443 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21352673
chr1 178578111 178578455 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21352674
chr1 178578226 178578546 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21352678
chr1 178578245 178578575 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21352679
chr1 178578249 178578579 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21352680
chr1 178578347 178578546 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21352681
chr1 178578432 178578442 MNX1 JASPAR yes 33427947
chr1 178578433 178578443 POU6F2 JASPAR yes 33427948
Genes associated with rs553999583[chr1:178578441], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More