EnhancerDB
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  3. rs554057868[chr1:28397843]
Enhancers that have rs554057868[chr1:28397843]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28387565 28408035 enh180
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Heart
Transcript factors that have rs554057868[chr1:28397843]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28397836 28397847 NFIL3 JASPAR yes 27737064
chr1 28397837 28397849 DBP JASPAR yes 27737065
chr1 28397837 28397849 HLF JASPAR yes 27737066
chr1 28397839 28397847 GMEB2 JASPAR yes 27737067
Genes associated with rs554057868[chr1:28397843], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More