EnhancerDB
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  3. rs554069675[chr2:75816407]
Enhancers that have rs554069675[chr2:75816407]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 75813119 75843795 enh18695
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Kidney Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Lung (PC-9) Astrocyte Brain (SK-N-MC) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Placenta Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs554069675[chr2:75816407]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 75816390 75816411 IRF1 JASPAR yes 75150653
chr2 75816392 75816407 STAT2 JASPAR yes 75150656
chr2 75816395 75816416 IRF1 JASPAR yes 75150657
chr2 75816397 75816412 STAT2 JASPAR yes 75150659
chr2 75816398 75816412 STAT1 JASPAR yes 75150660
chr2 75816402 75816417 LEF1 JASPAR yes 75150661
chr2 75816402 75816423 IRF1 JASPAR yes 75150662
chr2 75816402 75816423 ZNF263 JASPAR yes 75150663
chr2 75816404 75816419 FOXP1 JASPAR yes 75150664
chr2 75816404 75816425 IRF1 JASPAR yes 75150665
Genes associated with rs554069675[chr2:75816407], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More