EnhancerDB
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  3. rs554085685[chr1:178654315]
Enhancers that have rs554085685[chr1:178654315]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178647285 178660595 enh761
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Lung (A549) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast)
Transcript factors that have rs554085685[chr1:178654315]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178654301 178654316 FOXA1 JASPAR yes 33438443
Genes associated with rs554085685[chr1:178654315], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More