EnhancerDB
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  3. rs554250539[chr6:43794129]
Enhancers that have rs554250539[chr6:43794129]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43752825 43813215 enh23254
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs554250539[chr6:43794129]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 43794118 43794133 ZIC3 JASPAR yes 101789979
chr6 43794121 43794136 NR2C2 JASPAR yes 101789980
chr6 43794128 43794135 JUN TRANSFAC yes 101789981
Genes associated with rs554250539[chr6:43794129], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More