EnhancerDB
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  3. rs554271852[chr1:172939106]
Enhancers that have rs554271852[chr1:172939106]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172934137 172951875 enh12379
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Thymus Stomach
Transcript factors that have rs554271852[chr1:172939106]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172938123 172939437 TEF1 GTRD no Bone (Osteoblast) 21350791
chr1 172938123 172939437 TEF1 GTRD no Bone (Osteoblast) 107846511
chr1 172938586 172939119 ZNF274 GTRD no Cervix (HeLa-S3) 21350792
chr1 172938586 172939119 ZNF274 GTRD no Cervix (HeLa-S3) 107846512
chr1 172938661 172939211 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846516
chr1 172938762 172939146 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21350797
chr1 172938762 172939146 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846522
chr1 172938834 172939154 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21350802
chr1 172938834 172939154 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846531
Genes associated with rs554271852[chr1:172939106], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More