EnhancerDB
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Enhancers that have rs554354902[chr19:2058197]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2053625 2070755 enh4956
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myotube) Heart
Transcript factors that have rs554354902[chr19:2058197]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2053949 2063305 TCF7L2 GTRD no Colon (HCT116) 21834143
chr19 2053949 2063305 TCF7L2 GTRD no Colon (HCT116) 108356650
chr19 2053949 2063305 TCF7L2 GTRD no Colon (HCT116) 108356651
chr19 2053949 2063305 TCF7L2 GTRD no Colon (HCT116) 108356652
chr19 2054538 2058987 ZNF274 GTRD no Blood (GM12878) 108356654
chr19 2055323 2058813 ZNF274 GTRD no Bone Marrow (K562) 21834164
chr19 2055323 2058813 ZNF274 GTRD no Bone Marrow (K562) 108356662
chr19 2055341 2058723 ZNF274 GTRD no Bone Marrow (K562) 21834166
chr19 2055341 2058723 ZNF274 GTRD no Bone Marrow (K562) 108356663
chr19 2055359 2058651 ZNF274 GTRD no Bone Marrow (K562) 21834167
chr19 2055359 2058651 ZNF274 GTRD no Bone Marrow (K562) 108356665
chr19 2055437 2063159 TCF7L2 GTRD no Colon (HCT116) 21834173
chr19 2055437 2063159 TCF7L2 GTRD no Colon (HCT116) 108356670
chr19 2055437 2063159 TCF7L2 GTRD no Colon (HCT116) 108356671
chr19 2055437 2063159 TCF7L2 GTRD no Colon (HCT116) 108356672
chr19 2055452 2058398 ZBTB33 GTRD no Lung (A549) 108356673
chr19 2055870 2062676 TCF7L2 GTRD no Colon (HCT116) 21834189
chr19 2055870 2062676 TCF7L2 GTRD no Colon (HCT116) 108356693
chr19 2055870 2062676 TCF7L2 GTRD no Colon (HCT116) 108356694
chr19 2055870 2062676 TCF7L2 GTRD no Colon (HCT116) 108356695
chr19 2057315 2062845 TCF7L2 GTRD no Colon (HCT116) 21834291
chr19 2057315 2062845 TCF7L2 GTRD no Colon (HCT116) 108356844
chr19 2057315 2062845 TCF7L2 GTRD no Colon (HCT116) 108356845
chr19 2057388 2060290 ZNF274 GTRD no Bone Marrow (K562) 21834293
chr19 2057388 2060290 ZNF274 GTRD no Bone Marrow (K562) 108356846
chr19 2057392 2063475 TCF7L2 GTRD no Colon (HCT116) 21834294
chr19 2057392 2063475 TCF7L2 GTRD no Colon (HCT116) 108356847
chr19 2057392 2063475 TCF7L2 GTRD no Colon (HCT116) 108356848
chr19 2057459 2058654 ZNF274 GTRD no Bone Marrow (K562) 21834297
chr19 2057804 2058208 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21834299
chr19 2057905 2058238 ZNF274 GTRD no Bone Marrow (K562) 21834300
chr19 2057959 2058547 TCF7L2 GTRD no Colon (HCT116) 21834301
chr19 2057970 2058522 TCF7L2 GTRD no Colon (HCT116) 21834302
chr19 2057977 2058766 ZNF274 GTRD no Bone Marrow (K562) 21834303
chr19 2058117 2059225 P63 GTRD no Skin (Keratinocyte) 21834304
chr19 2058195 2058212 RARA JASPAR yes 112045543
chr19 2058196 2058208 TFAP2A JASPAR yes 112045544
chr19 2058197 2058206 TFAP2A JASPAR yes 112045545
Genes associated with rs554354902[chr19:2058197], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More