EnhancerDB
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  3. rs554378921[chr16:88570692]
Enhancers that have rs554378921[chr16:88570692]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88556185 88579980 enh52393
Bone Marrow (K562) Liver (HepG2) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Stomach Muscle (A673) Colon (HCT116) Pancreas Heart
Transcript factors that have rs554378921[chr16:88570692]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88570682 88570692 MSC JASPAR yes 12292252
chr16 88570682 88570696 GATA2 JASPAR yes 12292253
chr16 88570686 88570694 GATA3 JASPAR yes 12292254
Genes associated with rs554378921[chr16:88570692], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More