EnhancerDB
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  3. rs554408001[chr1:200269334]
Enhancers that have rs554408001[chr1:200269334]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200249825 200279179 enh867
Prostate (PC-3) Liver (HepG2) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs554408001[chr1:200269334]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200269324 200269343 REST JASPAR yes 34431623
Genes associated with rs554408001[chr1:200269334], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More