EnhancerDB
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  3. rs554415378[chr1:25240749]
Enhancers that have rs554415378[chr1:25240749]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25234025 25245136 enh26586
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Stomach Muscle (Myoblast) Muscle (Myotube) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs554415378[chr1:25240749]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25240734 25240749 AR JASPAR yes 27544298
chr1 25240734 25240751 NR3C1 JASPAR yes 27544299
chr1 25240734 25240751 NR3C2 JASPAR yes 27544300
chr1 25240739 25240751 GLI2 JASPAR yes 27544301
Genes associated with rs554415378[chr1:25240749], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More