EnhancerDB
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  3. rs554418545[chr16:88442233]
Enhancers that have rs554418545[chr16:88442233]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88439193 88457015 enh57695
Prostate (PC-3) Epithelial (MCF-7) Esophagus Bone (Osteoblast) Lung (A549) Stomach Colon (HCT116) Muscle (Myoblast) Pancreas Heart
Transcript factors that have rs554418545[chr16:88442233]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88436834 88446976 TCF7L2 GTRD no Colon (HCT116) 21736164
chr16 88439687 88446745 TCF7L2 GTRD no Colon (HCT116) 21736176
chr16 88440634 88447651 TCF7L2 GTRD no Colon (HCT116) 21736182
chr16 88440637 88447755 TCF7L2 GTRD no Colon (HCT116) 21736183
chr16 88440751 88447718 ZNF143 GTRD no Epithelial (MCF-7) 21736185
chr16 88440884 88446641 TCF7L2 GTRD no Colon (HCT116) 21736186
chr16 88441085 88447793 ZNF143 GTRD no Epithelial (MCF-7) 21736188
chr16 88441106 88444517 ZNF143 GTRD no Epithelial (MCF-7) 21736189
chr16 88441439 88444002 TCF7L2 GTRD no Colon (HCT116) 21736190
chr16 88441797 88443999 ZNF143 GTRD no Epithelial (MCF-7) 21736191
chr16 88441828 88444468 ZNF143 GTRD no Epithelial (MCF-7) 21736192
chr16 88442061 88443765 TCF7L2 GTRD no Colon (HCT116) 21736193
chr16 88442140 88443830 TCF7L2 GTRD no Colon (HCT116) 21736194
chr16 88442164 88444159 ZNF143 GTRD no Epithelial (MCF-7) 21736195
chr16 88442182 88444032 TCF7L2 GTRD no Colon (HCT116) 21736196
chr16 88442184 88443699 ZBTB33 GTRD no Lung (A549) 21736197
chr16 88442202 88443799 ZBTB33 GTRD no Lung (A549) 21736198
chr16 88442202 88443835 TCF7L2 GTRD no Colon (HCT116) 21736199
chr16 88442223 88442237 EBF1 JASPAR yes 12282091
chr16 88442225 88442236 EBF1 JASPAR yes 12282092
Genes associated with rs554418545[chr16:88442233], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More