EnhancerDB
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  3. rs554465729[chr2:216740475]
Enhancers that have rs554465729[chr2:216740475]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 216729405 216757455 enh19206
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Astrocyte Muscle (A673) Placenta Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myotube) Uterus
Transcript factors that have rs554465729[chr2:216740475]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 216740464 216740485 IRF1 JASPAR yes 80816863
chr2 216740467 216740481 SPI1 JASPAR yes 80816864
chr2 216740468 216740486 RARA JASPAR yes 80816865
Genes associated with rs554465729[chr2:216740475], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More