EnhancerDB
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  3. rs554539936[chr1:172712663]
Enhancers that have rs554539936[chr1:172712663]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172711957 172718375 enh730
Prostate (PC-3) Large Intestine Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Lung Blood (OCI-LY7) Lung (A549) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs554539936[chr1:172712663]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172712652 172712669 NR3C1 JASPAR yes 33150498
chr1 172712652 172712669 NR3C2 JASPAR yes 33150499
chr1 172712652 172712670 ESR2 JASPAR yes 33150500
chr1 172712654 172712669 AR JASPAR yes 33150501
Genes associated with rs554539936[chr1:172712663], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More