EnhancerDB
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  3. rs554573564[chr1:43450063]
Enhancers that have rs554573564[chr1:43450063]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43426314 43451580 enh11804
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs554573564[chr1:43450063]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43450051 43450072 IRF1 JASPAR yes 28474308
chr1 43450052 43450073 IRF1 JASPAR yes 28474309
chr1 43450054 43450069 FOXP1 JASPAR yes 28474311
chr1 43450058 43450073 FOXP1 JASPAR yes 28474312
chr1 43450059 43450071 FOXC2 JASPAR yes 28474313
chr1 43450061 43450065 YY1 TRANSFAC yes 28474314
chr1 43450062 43450083 IRF1 JASPAR yes 28474315
Genes associated with rs554573564[chr1:43450063], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More