-
Home
- SNP
- rs554576501[chr12:52741442]
Enhancers that have rs554576501[chr12:52741442]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
52736445 |
52747715 |
enh80197 |
|
|
Transcript factors that have rs554576501[chr12:52741442]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
52739831
|
52741482
|
AR
|
GTRD
|
no
|
Prostate (PC-3)
|
21546978
|
|
|
chr12
|
52740601
|
52742646
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21546980
|
|
|
chr12
|
52741287
|
52741947
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21546983
|
|
|
chr12
|
52741337
|
52742010
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21546984
|
|
|
chr12
|
52741338
|
52741959
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21546985
|
|
|
chr12
|
52741394
|
52741831
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21546986
|
|
|
chr12
|
52741403
|
52741979
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21546987
|
|
Genes associated with rs554576501[chr12:52741442], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |