EnhancerDB
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  3. rs554592470[chr1:54739218]
Enhancers that have rs554592470[chr1:54739218]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54732705 54747095 enh11864
Bone Marrow (K562) Astrocyte Adrenal Pancreas Uterus Kidney Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554592470[chr1:54739218]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54739157 54739866 CTCF UCSC Txn Factor no Conserved 107804668
chr1 54739178 54739694 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107804669
chr1 54739186 54739716 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107804670
chr1 54739206 54739226 ESR1 JASPAR yes 28967288
chr1 54739210 54739225 AR JASPAR yes 28967289
chr1 54739210 54739228 ESR2 JASPAR yes 28967290
chr1 54739211 54739226 ESR2 JASPAR yes 28967291
chr1 54739211 54739231 ESR1 JASPAR yes 28967292
chr1 54739216 54739229 NR2F1 JASPAR yes 28967293
chr1 54739218 54739229 ESRRA JASPAR yes 28967294
Genes associated with rs554592470[chr1:54739218], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More