EnhancerDB
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  3. rs554650177[chr1:21954952]
Enhancers that have rs554650177[chr1:21954952]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21946045 21974335 enh11591
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Thyroid Lung (PC-9) Pancreas Epithelial (MCF-7)
Transcript factors that have rs554650177[chr1:21954952]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21954941 21954954 SMAD2 JASPAR yes 27313967
chr1 21954944 21954954 TBR1 JASPAR yes 27313968
chr1 21954945 21954955 TBX21 JASPAR yes 27313969
chr1 21954946 21954954 MGA JASPAR yes 27313970
chr1 21954946 21954954 TBX15 JASPAR yes 27313971
chr1 21954946 21954954 TBX1 JASPAR yes 27313972
chr1 21954946 21954954 TBX4 JASPAR yes 27313973
chr1 21954946 21954954 TBX5 JASPAR yes 27313974
chr1 21954946 21954955 ZEB1 JASPAR yes 27313975
chr1 21954946 21954958 PKNOX1 JASPAR yes 27313976
chr1 21954946 21954958 TGIF1 JASPAR yes 27313977
chr1 21954946 21954959 ZBTB18 JASPAR yes 27313978
chr1 21954947 21954957 FIGLA JASPAR yes 27313979
chr1 21954947 21954957 ID4 JASPAR yes 27313980
chr1 21954947 21954957 TCF3 JASPAR yes 27313981
chr1 21954947 21954957 TCF4 JASPAR yes 27313982
chr1 21954948 21954957 SNAI2 JASPAR yes 27313983
chr1 21954949 21954954 USF2 TRANSFAC yes 27313984
Genes associated with rs554650177[chr1:21954952], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More