EnhancerDB
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  3. rs554675990[chr1:40497804]
Enhancers that have rs554675990[chr1:40497804]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40493285 40500220 enh49716
Brain (SK-N-SH) Prostate (RWPE1) Large Intestine Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs554675990[chr1:40497804]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40497798 40497813 MEF2C JASPAR yes 28310891
chr1 40497798 40497819 IRF1 JASPAR yes 28310892
chr1 40497802 40497808 TBP TRANSFAC yes 28310893
Genes associated with rs554675990[chr1:40497804], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More