EnhancerDB
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  3. rs554685618[chr6:42105887]
Enhancers that have rs554685618[chr6:42105887]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42097349 42109195 enh9110
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Brain (SK-N-MC) Bone (Osteoblast) Muscle (A673) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs554685618[chr6:42105887]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42105878 42105889 PHOX2A JASPAR yes 101695675
chr6 42105878 42105889 PROP1 JASPAR yes 101695676
chr6 42105879 42105889 PAX3 JASPAR yes 101695677
chr6 42105879 42105889 PAX7 JASPAR yes 101695678
chr6 42105882 42105902 RREB1 JASPAR yes 101695679
Genes associated with rs554685618[chr6:42105887], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More