EnhancerDB
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  3. rs554699524[chr2:39220232]
Enhancers that have rs554699524[chr2:39220232]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39217273 39221835 enh69638
Neural Stem Cells (H9) Brain (SK-N-MC)
Transcript factors that have rs554699524[chr2:39220232]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39220220 39220235 MEF2C JASPAR yes 73179230
chr2 39220221 39220232 PROP1 JASPAR yes 73179231
chr2 39220221 39220236 MEF2A JASPAR yes 73179232
chr2 39220222 39220234 MEF2A JASPAR yes 73179236
chr2 39220226 39220247 IRF1 JASPAR yes 73179237
chr2 39220228 39220243 FOXP1 JASPAR yes 73179238
chr2 39220229 39220244 FOXP1 JASPAR yes 73179239
chr2 39220230 39220236 TBP TRANSFAC yes 73179240
chr2 39220230 39220245 FOXP1 JASPAR yes 73179241
chr2 39220230 39220251 IRF1 JASPAR yes 73179242
chr2 39220231 39220246 FOXP1 JASPAR yes 73179243
Genes associated with rs554699524[chr2:39220232], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More