EnhancerDB
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  3. rs554738662[chr1:204367377]
Enhancers that have rs554738662[chr1:204367377]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204365519 204372255 enh12581
Bone Marrow (K562) Cervix (HeLa-S3) Prostate (RWPE1) Large Intestine Blood (T-cell) Stomach Placenta Lung (PC-9) Pancreas Thymus Epithelial (MCF-7)
Transcript factors that have rs554738662[chr1:204367377]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204366348 204367980 ZNF143 GTRD no Epithelial (MCF-7) 21370434
chr1 204366411 204368299 ZNF143 GTRD no Epithelial (MCF-7) 21370435
chr1 204366419 204367801 ZNF143 GTRD no Epithelial (MCF-7) 21370436
chr1 204366432 204367538 ZNF143 GTRD no Epithelial (MCF-7) 21370437
chr1 204366432 204367598 ZNF274 GTRD no Cervix (HeLa-S3) 21370438
chr1 204366437 204367843 ZNF143 GTRD no Epithelial (MCF-7) 21370439
chr1 204366440 204367760 ZNF143 GTRD no Epithelial (MCF-7) 21370440
chr1 204366463 204367528 ZNF274 GTRD no Bone Marrow (K562) 21370441
chr1 204366501 204367557 ZNF143 GTRD no Epithelial (MCF-7) 21370442
chr1 204366519 204367391 ZNF274 GTRD no Bone Marrow (K562) 21370443
chr1 204366582 204367747 ZNF143 GTRD no Epithelial (MCF-7) 21370446
chr1 204366591 204367972 ZNF143 GTRD no Epithelial (MCF-7) 21370447
chr1 204366615 204367551 ZNF274 GTRD no Bone Marrow (K562) 21370449
chr1 204366650 204367408 ZNF274 GTRD no Bone Marrow (K562) 21370453
chr1 204366663 204367388 ZNF274 GTRD no Bone Marrow (K562) 21370455
chr1 204367363 204367378 TFAP2C JASPAR yes 34698902
chr1 204367366 204367377 TFAP2A JASPAR yes 34698903
chr1 204367366 204367377 TFAP2B JASPAR yes 34698904
chr1 204367366 204367377 TFAP2C JASPAR yes 34698905
Genes associated with rs554738662[chr1:204367377], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More