EnhancerDB
  1. Home
  2. SNP
  3. rs554778802[chr16:2888770]
Enhancers that have rs554778802[chr16:2888770]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 2883745 2901765 enh16505
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Breast Lung (PC-9) Pancreas Pancreas (Panc1) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs554778802[chr16:2888770]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 2888764 2888773 ZEB1 JASPAR yes 9192061
chr16 2888764 2888776 NHLH1 JASPAR yes 9192062
chr16 2888766 2888780 RXRB JASPAR yes 9192063
chr16 2888767 2888772 USF2 TRANSFAC yes 9192064
Genes associated with rs554778802[chr16:2888770], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More