EnhancerDB
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  3. rs554784895[chr2:238651660]
Enhancers that have rs554784895[chr2:238651660]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238648865 238656355 enh34437
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs554784895[chr2:238651660]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238651645 238651666 IRF1 JASPAR yes 82139379
chr2 238651647 238651662 IRF9 JASPAR yes 82139380
chr2 238651649 238651663 STAT1 JASPAR yes 82139381
chr2 238651649 238651664 STAT2 JASPAR yes 82139382
chr2 238651658 238651678 RREB1 JASPAR yes 82139383
chr2 238651659 238651669 ZNF740 JASPAR yes 82139384
chr2 238651659 238651679 RREB1 JASPAR yes 82139385
chr2 238651660 238651670 ZNF740 JASPAR yes 82139386
chr2 238651660 238651680 RREB1 JASPAR yes 82139387
Genes associated with rs554784895[chr2:238651660], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More