EnhancerDB
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  3. rs554868263[chr1:17226678]
Enhancers that have rs554868263[chr1:17226678]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
Transcript factors that have rs554868263[chr1:17226678]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17226660 17226678 NR3C1 JASPAR yes 27063367
chr1 17226662 17226682 ESR1 JASPAR yes 27063368
chr1 17226674 17226692 RARA JASPAR yes 27063370
Genes associated with rs554868263[chr1:17226678], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More