EnhancerDB
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  3. rs554876334[chr1:202808847]
Enhancers that have rs554876334[chr1:202808847]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202799665 202809135 enh12543
Skin (Keratinocyte) Blood (T-cell) Esophagus Placenta Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs554876334[chr1:202808847]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202805621 202809087 ZNF143 GTRD no Epithelial (MCF-7) 21367517
chr1 202805988 202808870 ZNF143 GTRD no Epithelial (MCF-7) 21367519
chr1 202806697 202809215 ZNF143 GTRD no Epithelial (MCF-7) 21367526
chr1 202806727 202808848 ZNF143 GTRD no Epithelial (MCF-7) 21367530
chr1 202806769 202808900 ZNF143 GTRD no Epithelial (MCF-7) 21367535
chr1 202807267 202809026 ZNF143 GTRD no Epithelial (MCF-7) 21367537
chr1 202807395 202808956 ZNF143 GTRD no Epithelial (MCF-7) 21367539
chr1 202807424 202808876 ZNF143 GTRD no Epithelial (MCF-7) 21367541
chr1 202807650 202809073 ZNF143 GTRD no Epithelial (MCF-7) 21367544
chr1 202807681 202809094 ZNF143 GTRD no Epithelial (MCF-7) 21367545
chr1 202808832 202808847 MEF2C JASPAR yes 34592658
Genes associated with rs554876334[chr1:202808847], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More