EnhancerDB
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  3. rs554901516[chr1:38966776]
Enhancers that have rs554901516[chr1:38966776]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 38962385 38968215 enh262
Peripheral Blood (MM.1S) Neural Stem Cells (H9) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC)
Transcript factors that have rs554901516[chr1:38966776]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 38966759 38966779 RREB1 JASPAR yes 28223331
chr1 38966762 38966782 RREB1 JASPAR yes 28223333
chr1 38966766 38966781 RUNX2 JASPAR yes 28223335
chr1 38966771 38966785 JUN JASPAR yes 28223336
chr1 38966774 38966785 FOSL2 JASPAR yes 28223337
chr1 38966774 38966785 JUNB JASPAR yes 28223338
chr1 38966775 38966786 FOS JASPAR yes 28223339
chr1 38966775 38966786 FOSL1 JASPAR yes 28223340
chr1 38966775 38966786 JUND JASPAR yes 28223341
chr1 38966775 38966786 NFE2 JASPAR yes 28223342
chr1 38966776 38966785 JDP2 JASPAR yes 28223343
chr1 38966776 38966787 FOSL2 JASPAR yes 28223344
chr1 38966776 38966787 JUNB JASPAR yes 28223345
Genes associated with rs554901516[chr1:38966776], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More