EnhancerDB
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  3. rs554910848[chr1:17240454]
Enhancers that have rs554910848[chr1:17240454]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
chr1 17240188 17240783 vista545
VISTA
Transcript factors that have rs554910848[chr1:17240454]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17238935 17240465 ZBTB33 GTRD no Lung (A549) 107802245
chr1 17240445 17240454 TFAP2A JASPAR yes 27065054
chr1 17240445 17240454 TFAP2A JASPAR yes 118239927
chr1 17240449 17240455 SP1 TRANSFAC yes 27065055
chr1 17240449 17240455 SP1 TRANSFAC yes 118239928
chr1 17240450 17240455 SP1 TRANSFAC yes 27065056
chr1 17240450 17240455 SP1 TRANSFAC yes 118239929
Genes associated with rs554910848[chr1:17240454], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More