EnhancerDB
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  3. rs554952193[chr6:42173973]
Enhancers that have rs554952193[chr6:42173973]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42170105 42174275 enh55750
Prostate (PC-3) Liver (HepG2) Large Intestine Stomach
Transcript factors that have rs554952193[chr6:42173973]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42173956 42173977 IRF1 JASPAR yes 101698698
chr6 42173957 42173978 IRF1 JASPAR yes 101698700
chr6 42173958 42173973 FOXP1 JASPAR yes 101698701
chr6 42173958 42173979 IRF1 JASPAR yes 101698702
chr6 42173959 42173974 FOXP1 JASPAR yes 101698703
chr6 42173959 42173980 IRF1 JASPAR yes 101698704
chr6 42173960 42173975 FOXP1 JASPAR yes 101698705
chr6 42173960 42173981 IRF1 JASPAR yes 101698706
chr6 42173961 42173976 FOXP1 JASPAR yes 101698707
chr6 42173961 42173982 IRF1 JASPAR yes 101698708
chr6 42173962 42173977 FOXP1 JASPAR yes 101698709
chr6 42173964 42173979 FOXP1 JASPAR yes 101698710
chr6 42173965 42173986 IRF1 JASPAR yes 101698711
chr6 42173966 42173981 FOXP1 JASPAR yes 101698712
chr6 42173969 42173983 SPIC JASPAR yes 101698713
chr6 42173969 42173983 STAT1 JASPAR yes 101698714
chr6 42173969 42173984 PRDM1 JASPAR yes 101698715
chr6 42173969 42173984 STAT2 JASPAR yes 101698716
chr6 42173969 42173990 IRF1 JASPAR yes 101698717
chr6 42173971 42173992 IRF1 JASPAR yes 101698718
chr6 42173973 42173994 ZNF263 JASPAR yes 101698719
Genes associated with rs554952193[chr6:42173973], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More