EnhancerDB
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  3. rs554981090[chr1:2477611]
Enhancers that have rs554981090[chr1:2477611]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2471065 2481828 enh9
Bone Marrow (K562) Prostate (RWPE1) Blood (T-cell) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
chr1 2477415 2477971 vista78
VISTA
Transcript factors that have rs554981090[chr1:2477611]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2474585 2478941 TCF7L2 GTRD no Colon (HCT116) 107801828
chr1 2474585 2478941 TCF7L2 GTRD no Colon (HCT116) 107801829
chr1 2477602 2477612 BHLHE40 JASPAR yes 26243853
chr1 2477602 2477612 HEY1 JASPAR yes 26243854
chr1 2477602 2477612 MAX JASPAR yes 26243855
chr1 2477602 2477612 MNT JASPAR yes 26243856
chr1 2477602 2477612 SREBF2 JASPAR yes 26243857
chr1 2477602 2477612 TFE3 JASPAR yes 26243858
chr1 2477602 2477612 TFEB JASPAR yes 26243859
chr1 2477602 2477612 TFEC JASPAR yes 26243860
chr1 2477602 2477612 BHLHE40 JASPAR yes 118216875
chr1 2477602 2477612 HEY1 JASPAR yes 118216876
chr1 2477602 2477612 MAX JASPAR yes 118216877
chr1 2477602 2477612 MNT JASPAR yes 118216878
chr1 2477602 2477612 SREBF2 JASPAR yes 118216879
chr1 2477602 2477612 TFE3 JASPAR yes 118216880
chr1 2477602 2477612 TFEB JASPAR yes 118216881
chr1 2477602 2477612 TFEC JASPAR yes 118216882
chr1 2477602 2477613 USF1 JASPAR yes 26243861
chr1 2477602 2477613 USF2 JASPAR yes 26243862
chr1 2477602 2477613 USF1 JASPAR yes 118216883
chr1 2477602 2477613 USF2 JASPAR yes 118216884
chr1 2477602 2477616 PLAG1 JASPAR yes 26243863
chr1 2477602 2477616 PLAG1 JASPAR yes 118216885
chr1 2477603 2477613 MAX JASPAR yes 26243865
chr1 2477603 2477613 MAX JASPAR yes 118216887
chr1 2477610 2477622 TFAP2A JASPAR yes 26243869
chr1 2477610 2477622 TFAP2A JASPAR yes 118216891
Genes associated with rs554981090[chr1:2477611], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More