EnhancerDB
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  3. rs554983504[chr6:42350486]
Enhancers that have rs554983504[chr6:42350486]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42330865 42350575 enh9115
Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs554983504[chr6:42350486]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42350479 42350494 LEF1 JASPAR yes 101715553
chr6 42350480 42350494 TCF7L2 JASPAR yes 101715554
chr6 42350481 42350495 STAT1 JASPAR yes 101715555
Genes associated with rs554983504[chr6:42350486], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More