EnhancerDB
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  3. rs555162342[chr3:12218276]
Enhancers that have rs555162342[chr3:12218276]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 12214625 12224015 enh35191
Prostate (PC-3) Cervix (HeLa-S3) Ovary Esophagus Astrocyte Bone (Osteoblast) Stomach Colon (HCT116) Thyroid Lung (PC-9) Heart
Transcript factors that have rs555162342[chr3:12218276]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 12218272 12218276 YY1 TRANSFAC yes 461814
chr3 12218272 12218287 HNF1A JASPAR yes 461815
chr3 12218273 12218283 GSX1 JASPAR yes 461816
chr3 12218273 12218283 GSX2 JASPAR yes 461817
chr3 12218273 12218283 LHX2 JASPAR yes 461818
chr3 12218273 12218283 LHX6 JASPAR yes 461819
chr3 12218273 12218283 MNX1 JASPAR yes 461820
chr3 12218273 12218283 NOTO JASPAR yes 461821
chr3 12218273 12218283 POU6F1 JASPAR yes 461822
chr3 12218273 12218283 RAX JASPAR yes 461823
chr3 12218273 12218286 HNF1B JASPAR yes 461824
chr3 12218274 12218282 ISX JASPAR yes 461825
chr3 12218274 12218282 LMX1A JASPAR yes 461826
chr3 12218274 12218282 LMX1B JASPAR yes 461827
chr3 12218274 12218282 NKX6-1 JASPAR yes 461828
chr3 12218274 12218282 NKX6-2 JASPAR yes 461829
chr3 12218274 12218282 PRRX1 JASPAR yes 461830
chr3 12218274 12218282 RAX2 JASPAR yes 461831
chr3 12218274 12218282 SHOX JASPAR yes 461832
chr3 12218274 12218282 UNCX JASPAR yes 461833
chr3 12218274 12218282 VAX1 JASPAR yes 461834
Genes associated with rs555162342[chr3:12218276], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More