EnhancerDB
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  3. rs555206868[chr1:201885821]
Enhancers that have rs555206868[chr1:201885821]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201879005 201889035 enh12530
Cervix (HeLa-S3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Heart
Transcript factors that have rs555206868[chr1:201885821]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201879954 201886120 ZBTB33 GTRD no Lung (A549) 107857151
chr1 201881673 201889087 ZNF274 GTRD no Bone Marrow (K562) 107857153
chr1 201882451 201886182 ZNF274 GTRD no Cervix (HeLa-S3) 21365301
chr1 201882451 201886182 ZNF274 GTRD no Cervix (HeLa-S3) 107857176
chr1 201885805 201885826 ZNF263 JASPAR yes 34537424
chr1 201885807 201885824 RXRA JASPAR yes 34537427
chr1 201885811 201885822 E2F6 JASPAR yes 34537430
chr1 201885813 201885821 SP1 TRANSFAC yes 34537431
chr1 201885813 201885823 SP1 JASPAR yes 34537432
chr1 201885815 201885821 MAZ TRANSFAC yes 34537433
chr1 201885818 201885829 NFKB1 JASPAR yes 34537434
chr1 201885818 201885831 NFKB1 JASPAR yes 34537435
chr1 201885818 201885831 NFKB2 JASPAR yes 34537436
chr1 201885819 201885829 NFKB1 JASPAR yes 34537437
chr1 201885819 201885829 RELA JASPAR yes 34537438
chr1 201885819 201885830 NFKB1 JASPAR yes 34537439
chr1 201885820 201885830 NFKB1 JASPAR yes 34537440
chr1 201885820 201885830 RELA JASPAR yes 34537441
Genes associated with rs555206868[chr1:201885821], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More